Stewart JA, Schauer G, Bhagwat AS. Visualization of uracils created by APOBEC3A using UdgX shows colocalization with RPA at stalled replication forks. Nucleic acids research (2020) 48(20):e118. Epub 2020/10/20. doi: 10.1093/nar/gkaa845. PubMed PMID: 33074285; PMCID: PMC7672425.

Stewart JA, Holland TC, Bhagwat AS. Human Herpes Simplex Virus-1 depletes APOBEC3A from nuclei. Virology (2019) 537:104-9. Epub 2019/09/08. doi: 10.1016/j.virol.2019.08.012. PubMed PMID: 31493648; PMCID: PMC6901759.

Siriwardena SU, Perera MLW, Senevirathne V, Stewart J, Bhagwat AS. A Tumor-Promoting Phorbol Ester Causes a Large Increase in APOBEC3A Expression and a Moderate Increase in APOBEC3B Expression in a Normal Human Keratinocyte Cell Line without Increasing Genomic Uracils. Molecular and cellular biology (2019) 39(1). Epub 2018/10/24. doi: 10.1128/mcb.00238-18. PubMed PMID: 30348839; PMCID: PMC6290372.

Sakhtemani R, Senevirathne V, Stewart J, Perera MLW, Pique-Regi R, Lawrence MS, Bhagwat AS. Genome-wide mapping of regions preferentially targeted by the human DNA-cytosine deaminase APOBEC3A using uracil-DNA pulldown and sequencing. The Journal of biological chemistry (2019) 294(41):15037-51. Epub 2019/08/23. doi: 10.1074/jbc.RA119.008053. PubMed PMID: 31431505; PMCID: PMC6791317.

Owiti N, Wei S, Bhagwat AS, Kim N. Unscheduled DNA synthesis leads to elevated uracil residues at highly transcribed genomic loci in Saccharomyces cerevisiae. PLoS genetics (2018) 14(7):e1007516. Epub 2018/07/18. doi: 10.1371/journal.pgen.1007516. PubMed PMID: 30016327; PMCID: PMC6063437.

Wei S, Perera MLW, Sakhtemani R, Bhagwat AS. A novel class of chemicals that react with abasic sites in DNA and specifically kill B cell cancers. PloS one (2017) 12(9):e0185010. Epub 2017/09/20. doi: 10.1371/journal.pone.0185010. PubMed PMID: 28926604; PMCID: PMC5605088.

Siriwardena SU, Chen K, Bhagwat AS. Functions and Malfunctions of Mammalian DNA-Cytosine Deaminases. Chemical reviews (2016) 116(20):12688-710. Epub 2016/09/02. doi: 10.1021/acs.chemrev.6b00296. PubMed PMID: 27585283; PMCID: PMC5528147.

Green AM, Landry S, Budagyan K, Avgousti DC, Shalhout S, Bhagwat AS, Weitzman MD. APOBEC3A damages the cellular genome during DNA replication. Cell cycle (Georgetown, Tex) (2016) 15(7):998-1008. Epub 2016/02/27. doi: 10.1080/15384101.2016.1152426. PubMed PMID: 26918916; PMCID: PMC4889253.

Bhagwat AS, Hao W, Townes JP, Lee H, Tang H, Foster PL. Strand-biased cytosine deamination at the replication fork causes cytosine to thymine mutations in Escherichia coli. Proceedings of the National Academy of Sciences of the United States of America (2016) 113(8):2176-81. Epub 2016/02/04. doi: 10.1073/pnas.1522325113. PubMed PMID: 26839411; PMCID: PMC4776466.

Wei S, Shalhout S, Ahn YH, Bhagwat AS.A versatile new tool to quantify abasic sites in DNA and inhibit base excision repair. DNA repair (2015) 27:9-18. Epub 2015/01/24. doi: 10.1016/j.dnarep.2014.12.006. PubMed PMID: 25616257; PMCID: PMC4336807.

Siriwardena SU, Guruge TA, Bhagwat AS. Characterization of the Catalytic Domain of Human APOBEC3B and the Critical Structural Role for a Conserved Methionine. Journal of molecular biology (2015) 427(19):3042-55. Epub 2015/08/19. doi: 10.1016/j.jmb.2015.08.006. PubMed PMID: 26281709; PMCID: PMC4579057.